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Case Report| Volume 45, ISSUE 4, P244-249, April 2023

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A novel splice site CUL3 variant in a patient with neurodevelopmental delay

      Abstract

      Background

      CUL3-related neurodevelopmental disorder is a recently described rare genetic condition characterized by global developmental delay and intellectual disability. Five affected individuals have been reported worldwide. The molecular and phenotypic spectrum of the disorder has yet to be fully elucidated. Splice variants in CUL3 are a well-described cause of pseudohypoaldosteronism type IIE; however, splice variants have not been associated with the neurodevelopmental disorder. We report the first individual with a neurodevelopmental disorder attributed to a CUL3 splice site variant.

      Case Report

      The patient presented with congenital developmental dysplasia of the hip and global developmental delay. A de novo splice site variant (c.379-2A > G) was identified in CUL3 and is predicted to abolish the acceptor splice site.

      Conclusion

      This is the first report of an individual with a splice site variant causing CUL3-related neurodevelopmental disorder and expands our understanding of this rare condition.

      Keywords

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      References

        • Nguyen H.C.
        • Wang W.
        • Xiong Y.
        Cullin-RING E3 Ubiquitin Ligases: Bridges to Destruction.
        Subcell Biochem. 2017; 83: 323-347
        • Kong A.
        • Frigge M.L.
        • Masson G.
        • Besenbacher S.
        • Sulem P.
        • Magnusson G.
        • et al.
        Rate of de novo mutations and the importance of father's age to disease risk.
        Nature. 2012; 488: 471-475
        • da Silva Montenegro E.M.
        • Costa C.S.
        • Campos G.
        • Scliar M.
        • de Almeida T.F.
        • Zachi E.C.
        • et al.
        Meta-Analyses Support Previous and Novel Autism Candidate Genes: Outcomes of an Unexplored Brazilian Cohort.
        Autism Res. 2020; 13: 199-206
        • O'Roak B.J.
        • Vives L.
        • Girirajan S.
        • Karakoc E.
        • Krumm N.
        • Coe B.P.
        • et al.
        Sporadic autism exomes reveal a highly interconnected protein network of de novo mutations.
        Nature. 2012; 485: 246-250
        • Zaidi S.
        • Choi M.
        • Wakimoto H.
        • Ma L.
        • Jiang J.
        • Overton J.D.
        • et al.
        De novo mutations in histone-modifying genes in congenital heart disease.
        Nature. 2013; 498: 220-223
        • Codina-Sola M.
        • Rodriguez-Santiago B.
        • Homs A.
        • Santoyo J.
        • Rigau M.
        • Aznar-Lain G.
        • et al.
        Integrated analysis of whole-exome sequencing and transcriptome profiling in males with autism spectrum disorders.
        Mol Autism. 2015; 6: 21
        • Nakashima M.
        • Kato M.
        • Matsukura M.
        • Kira R.
        • Ngu L.H.
        • Lichtenbelt K.D.
        • et al.
        De novo variants in CUL3 are associated with global developmental delays with or without infantile spasms.
        J Hum Genet. 2020; 65: 727-734
        • Glover M.
        • Ware J.S.
        • Henry A.
        • Wolley M.
        • Walsh R.
        • Wain L.V.
        • et al.
        Detection of mutations in KLHL3 and CUL3 in families with FHHt (familial hyperkalaemic hypertension or Gordon’s syndrome).
        Clin Sci. 2014; 126: 721-726
        • Lek M.
        • Karczewski K.J.
        • Minikel E.V.
        • Samocha K.E.
        • Banks E.
        • Fennell T.
        • et al.
        Analysis of protein-coding genetic variation in 60,706 humans.
        Nature. 2016; 536: 285-291
        • Jaganathan K.
        • Kyriazopoulou Panagiotopoulou S.
        • McRae J.F.
        • Darbandi S.F.
        • Knowles D.
        • Li Y.I.
        • et al.
        Predicting Splicing from Primary Sequence with Deep Learning.
        Cell. 2019; 176: 535-48 e24
        • Rentzsch P.
        • Schubach M.
        • Shendure J.
        • Kircher M.
        CADD-Splice-improving genome-wide variant effect prediction using deep learning-derived splice scores.
        Genome Med. 2021; 13: 31
        • Richards S.
        • Aziz N.
        • Bale S.
        • Bick D.
        • Das S.
        • Gastier-Foster J.
        • et al.
        Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.
        Genet Med. 2015; 17: 405-424
        • Kato K.
        • Miya F.
        • Oka Y.
        • Mizuno S.
        • Saitoh S.
        A novel missense variant in CUL3 shows altered binding ability to BTB-adaptor proteins leading to diverse phenotypes of CUL3-related disorders.
        J Hum Genet. 2021; 66: 491-498
        • Iwafuchi S.
        • Kikuchi A.
        • Endo W.
        • Inui T.
        • Aihara Y.
        • Satou K.
        • et al.
        A novel stop-gain CUL3 mutation in a Japanese patient with autism spectrum disorder.
        Brain Dev. 2021; 43: 303-307
        • Collado-Torres L.
        • Burke E.E.
        • Peterson A.
        • Shin J.
        • Straub R.E.
        • Rajpurohit A.
        • et al.
        Regional Heterogeneity in Gene Expression, Regulation, and Coherence in the Frontal Cortex and Hippocampus across Development and Schizophrenia.
        Neuron. 2019; 103: 203-16 e8
        • Kouranti I.
        • Abdel Khalek W.
        • Mazurkiewicz S.
        • Loisel-Ferreira I.
        • Gautreau A.M.
        • Pintard L.
        • et al.
        Cullin 3 Exon 9 Deletion in Familial Hyperkalemic Hypertension Impairs Cullin3-Ring-E3 Ligase (CRL3) Dynamic Regulation and Cycling.
        Int J Mol Sci. 2022; 23
        • Cornelius R.J.
        • Zhang C.
        • Erspamer K.J.
        • Agbor L.N.
        • Sigmund C.D.
        • Singer J.D.
        • et al.
        Dual gain and loss of cullin 3 function mediates familial hyperkalemic hypertension.
        Am J Physiol Renal Physiol. 2018; 315: F1006-F1018
        • Dong Z.
        • Chen W.
        • Chen C.
        • Wang H.
        • Cui W.
        • Tan Z.
        • et al.
        CUL3 Deficiency Causes Social Deficits and Anxiety-like Behaviors by Impairing Excitation-Inhibition Balance through the Promotion of Cap-Dependent Translation.
        Neuron. 2020; 105: 475-490 e6
        • Amar M.
        • Pramod A.B.
        • Yu N.K.
        • Herrera V.M.
        • Qiu L.R.
        • Moran-Losada P.
        • et al.
        Autism-linked Cullin3 germline haploinsufficiency impacts cytoskeletal dynamics and cortical neurogenesis through RhoA signaling.
        Mol Psychiatry. 2021; 26: 3586-3613
        • Morandell J.
        • Schwarz L.A.
        • Basilico B.
        • Tasciyan S.
        • Dimchev G.
        • Nicolas A.
        • et al.
        Cul3 regulates cytoskeleton protein homeostasis and cell migration during a critical window of brain development.
        Nat Commun. 2021; 12: 3058