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Original article| Volume 27, ISSUE 5, P331-339, August 2005

Histone modifications in Rett syndrome lymphocytes: a preliminary evaluation

      Abstract

      Most cases of Rett syndrome (RTT) are associated with mutations in the coding region of the transcriptional regulator MeCP2. This gene appears to repress gene expression through chromatin conformational changes secondary to histone modifications, mainly histone deacetylation of core histones H3 and H4. There is limited and contradictory information about histone modifications in RTT tissues. The present study intended to provide a preliminary characterization of histone acetylation (AcH3, AcH4) and methylation (MeH3) in RTT, with emphasis on non-selected peripheral cells and molecular-neurologic correlations. We compared 17 females with RTT, 11 of them with MeCP2 mutations, with 10 gender-matched controls in terms of lymphocyte lysate immunoblotting-based levels. We found that immunoreactivities for MeCP2 and AcH3/AcH4 are variable in both control and RTT subjects. Despite this variability, RTT subjects with nonsense mutations showed the expected reduction in C-terminal MeCP2 immunoreactivity. Regardless of MeCP2 levels, both subjects with (RTTPos) and without (RTTNeg) mutations had decreased levels of AcH3. The latter reductions were mainly driven by decreases in levels of H3 acetylated at lysine residue 14 (AcH3K14) and independent of parallel, but milder, decreases in immunoreactivity for MeH3 lysine residues (MeH3K4/MeH3K9). Within our study sample, reductions in AcH3 were correlated with severity of head growth deceleration in the RTTPos group. This contrasted with the lack of significant association between location of MeCP2 mutation and severity of the RTT neurologic phenotype. We concluded that there were distinctive profiles of histone acetylation/methylation in RTT peripheral cells, which reflect pathogenetic mechanisms common to subjects with clinical features of this disorder, regardless of mutation status, and that these patterns may be relevant to neurologic dysfunction in RTT.

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      References

        • Naidu S.
        Rett syndrome: a disorder affecting early brain growth.
        Ann Neurol. 1997; 42: 3-10
        • Van den Veyver I.B.
        • Zoghbi H.Y.
        Mutations in the gene encoding methyl-CpG-binding protein 2 cause Rett syndrome.
        Brain Dev. 2001; 23: S147-S151
        • Nan X.
        • Campoy F.J.
        • Bird A.
        MeCP2 is a transcriptional repressor with abundant binding sites in genomic chromatin.
        Cell. 1997; 88: 471-481
        • Ballestar E.
        • Wolfe A.P.
        Methyl-CpG binding proteins: targeting specific gene repression.
        Eur J Biochem. 2001; 268: 1-6
        • Wade P.A.
        Methyl CpG-binding proteins and transcriptional repression.
        Bioessays. 2001; 23: 1131-1137
        • Fuks F.
        • Hurd P.J.
        • Wolf D.
        • Nan X.
        • Bird A.P.
        • Kouzarides T.
        The methyl-CpG-binding protein MeCP2 links DNA methylation to histone methylation.
        J Biol Chem. 2003; 278: 4035-4040
        • Jenuwein T.
        • Allis C.D.
        Translating the histone code.
        Science. 2001; 293: 1074-1080
        • Dillon N.
        • Festenstein R.
        Unravelling heterochromatin: competition between positive and negative factors regulates accessibility.
        Trends Genet. 2002; 18 (Eliminate): 252-258
        • Turner B.M.
        Cellular memory and the histone code.
        Cell. 2002; 111: 285-291
        • Chen W.G.
        • Chang Q.
        • Lin Y.
        • Meissner A.
        • West A.E.
        • Griffith E.C.
        • et al.
        Derepression of BDNF transcription involves calcium-dependent phosphorylation of MeCP2.
        Science. 2003; 302: 885-889
        • Lee S.S.
        • Wan M.
        • Francke U.
        Spectrum of MECP2 mutations in Rett syndrome.
        Brain Dev. 2001; 23: S138-S143
        • Hoffbuhr K.C.
        • Moses L.M.
        • Jerdonek M.A.
        • Naidu S.
        • Hoffman E.P.
        Associations between MeCP2 mutations, X-chromosome inactivation, and phenotype.
        Ment Retard Dev Disabil Res Rev. 2002; 8: 99-105
        • Yusufzai T.M.
        • Wolffe A.P.
        Functional consequences of Rett syndrome mutations on human MeCP2.
        Nucleic Acids Res. 2000; 28: 4172-4179
        • Free A.
        • Wakefield R.I.
        • Smith B.O.
        • Dryden D.T.
        • Barlow P.N.
        • Bird A.P.
        DNA recognition by the methyl-CpG binding domain of MeCP2.
        J Biol Chem. 2001; 276: 3353-3360
        • Kudo S.
        • Nomura Y.
        • Segawa M.
        • Fujita N.
        • Nakao M.
        • Dragich J.
        • et al.
        Functional analyses of MeCP2 mutations associated with Rett syndrome using transient expression systems.
        Brain Dev. 2001; 23: S165-S173
        • Kudo S.
        • Nomura Y.
        • Segawa M.
        • Fujita N.
        • Nakao M.
        • Schanen C.
        • et al.
        Heterogeneity in residual function of MeCP2 carrying missense mutations in the methyl CpG binding domain.
        J Med Genet. 2003; 40: 487-493
        • Shahbazian M.
        • Young J.
        • Yuva-Paylor L.
        • Spencer C.
        • Antalffy B.
        • Noebels J.
        • et al.
        Mice with truncated MeCP2 recapitulate many Rett syndrome features and display hyperacetylation of histone H3.
        Neuron. 2002; 35: 243-254
        • Young J.I.
        • Zoghbi H.Y.
        X-chromosome inactivation patterns are unbalanced and affect the phenotypic outcome in a mouse model of Rett syndrome.
        Am J Hum Genet. 2004; 74: 511-520
        • Wan M.
        • Zhao K.
        • Lee S.S.
        • Francke U.
        MECP2 truncating mutations cause histone H4 hyperacetylation in Rett syndrome.
        Hum Mol Genet. 2001; 10: 1085-1092
        • Balmer D.
        • Arredondo J.
        • Samaco R.C.
        • LaSalle J.M.
        MECP2 mutations in Rett syndrome adversely affect lymphocyte growth, but do not affect imprinted gene expression in blood or brain.
        J Hum Genet. 2002; 110: 545-552
        • Amano K.
        • Nomura Y.
        • Segawa M.
        • Yamakawa K.
        Mutational analysis of the MECP2 gene in Japanese patients with Rett syndrome.
        J Hum Genet. 2000; 45: 231-236
        • Amir R.E.
        • Van den Veyver I.B.
        • Schultz R.
        • Malicki D.M.
        • Tran C.Q.
        • Dahle E.J.
        • et al.
        Influence of mutation type and X chromosome inactivation on Rett syndrome phenotypes.
        Ann Neurol. 2000; 47: 670-679
        • Bienvenu T.
        • Carrie A.
        • de Roux N.
        • Vinet M.C.
        • Jonveaux P.
        • Couvert P.
        • et al.
        MECP2 mutations account for most cases of typical forms of Rett syndrome.
        Hum Mol Genet. 2000; 9: 1377-1384
        • Cheadle J.P.
        • Gill H.
        • Fleming N.
        • Maynard J.
        • Kerr A.
        • Leonard H.
        • et al.
        Long-read sequence analysis of the MECP2 gene in Rett syndrome patients: correlation of disease severity with mutation type and location.
        Hum Mol Genet. 2000; 9: 1119-1129
        • Huppke P.
        • Laccone F.
        • Kramer N.
        • Engel W.
        • Hanefeld F.
        Rett syndrome: analysis of MECP2 and clinical characterization of 31 patients.
        Hum Mol Genet. 2000; 9: 1369-1375
        • Auranen M.
        • Vanhala R.
        • Vosman M.
        • Levander M.
        • Varilo T.
        • Hietala M.
        • et al.
        MECP2 gene analysis in classical Rett syndrome and in patients with Rett-like features.
        Neurology. 2001; 56: 611-617
        • Hoffbuhr K.
        • Devaney J.M.
        • LaFleur B.
        • Sirianni N.
        • Scacheri C.
        • Giron J.
        • et al.
        MeCP2 mutations in children with and without the phenotype of Rett syndrome.
        Neurology. 2001; 56: 1486-1495
        • Huppke P.
        • Held M.
        • Hanefeld F.
        • Engel W.
        • Laccone F.
        Influence of mutation type and location on phenotype in 123 patients with Rett syndrome.
        Neuropediatrics. 2002; 33: 63-68
        • Chae J.H.
        • Hwang Y.S.
        • Kim K.J.
        Mutation analysis of MECP2 and clinical characterization in Korean patients with Rett syndrome.
        J Child Neurol. 2002; 17: 33-36
        • Weaving L.S.
        • Williamson S.L.
        • Bennetts B.
        • Davis M.
        • Ellaway C.J.
        • Leonard H.
        • et al.
        Effects of MECP2 mutation type, location and X-inactivation in modulating Rett syndrome phenotype.
        Am J Med Genet. 2003; 118A: 103-114
        • Naidu S.
        • Bibat G.
        • Kratz L.
        • Kelley R.I.
        • Pevsner J.
        • Hoffman E.
        • et al.
        Clinical variability in Rett syndrome.
        J Child Neurol. 2003; 18: 662-668
        • Leonard H.
        • Colvin L.
        • Christodoulou J.
        • Schiavello T.
        • Williamson S.
        • Davis M.
        • et al.
        Patients with the R133C mutation: is their phenotype different from patients with Rett syndrome with other mutations?.
        J Med Genet. 2003; 40: e52
        • Mole L.
        • Margolis D.
        • Carroll R.
        • Todd J.
        • Holodniy M.
        Stabilities of quantitative plasma culture for human immunodeficiency virus, RNA, and p24 antigen from samples collected in Vacutainer CPT and standard Vacutainer tubes.
        J Clin Microbiol. 1994; 32: 2212-2215
        • Kaufmann W.E.
        • Abrams M.T.
        • Chen W.
        • Reiss A.L.
        Genotype, molecular phenotype, and cognitive phenotype: correlations in fragile X syndrome.
        Am J Med Genet. 1999; 83: 286-295
        • Sun H.T.
        • Cohen S.
        • Kaufmann W.E.
        Annexin-1 is abnormally expressed in fragile X syndrome: two dimensional electrophoresis study in lymphocytes.
        Am J Med Genet. 2001; 103: 81-90
        • Jarrar M.H.
        • Danko C.G.
        • Reddy S.
        • Lee Y.M.
        • Bibat G.
        • Kaufmann W.E.
        MeCP2 expression in human cerebral cortex and lymphoid cells: immunochemical characterization of a novel higher molecular weight form.
        J Child Neurol. 2003; 18: 675-682
        • LaSalle J.M.
        • Goldstine J.
        • Balmer D.
        • Greco C.M.
        Quantitative localization of heterogeneous methyl-CpG-binding protein 2 (MeCP2) expression phenotypes in normal and Rett syndrome brain by laser scanning cytometry.
        Hum Mol Genet. 2001; 10: 1729-1740
        • Aber K.M.
        • Nori P.
        • MacDonald S.
        • Bibat G.
        • Jarrar M.H.
        • Kaufmann W.E.
        Methyl-CpG-binding protein 2 is localized in the postsynaptic compartment: an immunochemical study of subcellular fractions.
        Neuroscience. 2003; 116: 77-80
        • Wechsler D.
        Wechsler intelligence scale for children.
        3rd ed. Psychological Corporation, San Antonio, TX1991
        • Achenbach T.
        Manual for the child behavior checklist (parent form).
        University Associates in Psychiatry, Burlington, VT1991
        • Welner Z.
        • Reich W.
        • Herjanic B.
        • Jung K.G.
        • Amado H.
        Reliability, validity, and parent-child agreement studies of the Diagnostic Interview for Children and Adolescents (DICA).
        J Am Acad Child Adolesc Psychiatry. 1987; 26: 649-653
        • Conners C.K.
        Conners' rating scales manual.
        Multi-Health Systems, Toronto1989
        • Cutting L.E.
        • Cooper K.L.
        • Koth C.W.
        • Mostofsky S.H.
        • Kates W.R.
        • Denckla M.B.
        • et al.
        Megalencephaly in NF1: predominantly white matter contribution and mitigation by ADHD.
        Neurology. 2002; 59: 1388-1394
        • Kaufmann W.E.
        • Cooper K.L.
        • Mostofsky S.H.
        • Capone G.T.
        • Kates W.R.
        • Newschaffer C.J.
        • et al.
        Specificity of cerebellar vermian abnormalities in autism: a quantitative magnetic resonance imaging study.
        J Child Neurol. 2003; 18: 463-470
        • Coffee B.
        • Zhang F.
        • Ceman S.
        • Warren S.T.
        • Reines D.
        Histone modifications depict an aberrantly heterochromatinized FMR1 gene in fragile X syndrome.
        Am J Hum Genet. 2002; 71: 923-932
        • Hagberg B.
        • Hanefeld F.
        • Percy A.
        • Skjeldal O.
        An update on clinically applicable diagnostic criteria in Rett syndrome. Comments to Rett Syndrome Clinical Criteria Consensus Panel Satellite to European Paediatric Neurology Society Meeting, Baden Baden, Germany, 11 September 2001.
        Eur J Paediatr Neurol. 2002; 6: 293-297
        • Coffee B.
        • Zhang F.
        • Warren S.T.
        • Reines D.
        Acetylated histones are associated with FMR1 in normal but not fragile X syndrome cells.
        Nat Genet. 1999; 22: 98-101
        • Tudor M.
        • Akbarian S.
        • Chen R.Z.
        • Jaenisch R.
        Transcriptional profiling of a mouse model for Rett syndrome reveals subtle transcriptional changes in the brain.
        Proc Natl Acad Sci USA. 2002; 99: 15536-15541
        • Traynor J.
        • Agarwal P.
        • Lazzeroni L.
        • Francke U.
        Gene expression patterns vary in clonal cell cultures from Rett syndrome females with eight different MECP2 mutations.
        BMC Med Genet. 2002; 3: 12
        • Cheung P.
        • Tanner K.G.
        • Cheung W.L.
        • Sassone-Corsi P.
        • Denu J.M.
        • Allis C.D.
        Synergistic coupling of histone H3 phosphorylation and acetylation in response to epidermal growth factor stimulation.
        Mol Cell. 2000; 5: 905-915
        • Li J.
        • Lin Q.
        • Yoon H.G.
        • Huang Z.Q.
        • Strahl B.D.
        • Allis C.D.
        • et al.
        Involvement of histone methylation and phosphorylation in regulation of transcription by thyroid hormone receptor.
        Mol Cell Biol. 2002; 22: 5688-5697
        • Crosio C.
        • Heitz E.
        • Allis C.D.
        • Borrelli E.
        • Sassone-Corsi P.
        Chromatin remodeling and neuronal response: multiple signaling pathways induce specific histone H3 modifications and early gene expression in hippocampal neurons.
        J Cell Sci. 2003; 116: 4905-4914
        • Tsankova N.M.
        • Kumar A.
        • Nestler E.J.
        Histone modifications at gene promoter regions in rat hippocampus after acute and chronic electroconvulsive seizures.
        J Neurosci. 2004; 24: 5603-5610
        • He H.
        • Lehming N.
        Global effects of histone modifications.
        Brief Funct Genomic Proteomic. 2003; 2: 234-243
        • Samaco R.C.
        • Nagarajan R.P.
        • Braunschweig D.
        • LaSalle J.M.
        Multiple pathways regulate MeCP2 expression in normal brain development and exhibit defects in autism-spectrum disorders.
        Hum Mol Genet. 2004; 13: 629-639
        • Johnston M.V.
        • Mullaney B.
        • Blue M.E.
        Neurobiology of Rett syndrome.
        J Child Neurol. 2003; 18: 688-692